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Astrobs-Tools.sh Executable file
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#!/bin/bash
source activate.sh
if ! command -v python3 2>&1 >/dev/null; then
printf "\033[91mError: Please install python3 or newer version\033[0m\n"
else
version=$(pip3 freeze | sed -r "s/==|\./ /g" | awk '$1 == "astropy" {print $2}')
if [ -z $version ]; then
printf "\033[91mError: Astropy 6.0 is required\033[0m\n"
elif [ $version -lt 6 ]; then
printf "\033[91mError: Please install astropy 6.0 or newer version\033[0m\n"
else
clear
python Source/ASTROBS_SELECT_v1.py
fi
fi

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This is free software, and you are welcome to redistribute it
under certain conditions; type `show c' for details.
The hypothetical commands `show w' and `show c' should show the appropriate
parts of the General Public License. Of course, your program's commands
might be different; for a GUI interface, you would use an "about box".
You should also get your employer (if you work as a programmer) or school,
if any, to sign a "copyright disclaimer" for the program, if necessary.
For more information on this, and how to apply and follow the GNU GPL, see
<https://www.gnu.org/licenses/>.
The GNU General Public License does not permit incorporating your program
into proprietary programs. If your program is a subroutine library, you
may consider it more useful to permit linking proprietary applications with
the library. If this is what you want to do, use the GNU Lesser General
Public License instead of this License. But first, please read
<https://www.gnu.org/licenses/why-not-lgpl.html>.

36
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# Astronomical Observation Tools
Astronomical Observation Tools (Astrobs Tools) is composed of:
- SCOPE: a code to get the sky coordinate limits from observation constraints;
- EQUATOR: a software to organize targets before observations.
## Requirements
Astrobs Tools requires `Python 3.10` or newer
## Setup
First step is to initialize a virtual environment for the software with:
```
python3 -m venv ./venv
```
Then install the required packages with:
```
source activate.sh && pip install -r requirements.txt && deactivate
```
You may also require to authorize the execution of Astrobs Tools with:
```
chmod u+x Astrobs-Tools.sh
```
## Usage
To launch Astrobs tools, simply execute:
```
./Astrobs-Tools.sh
```
To be continued...

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import SCOPE_v2_2
import EQUATOR_v1_1
QUIT = ["QUIT", "EXIT", "Q"]
DONE = ["DONE", "OK"]
SCOPE = ["SCOPE"]
EQUATOR = ["EQUATOR"]
stop = False
first = True
while not stop:
if first:
print("\033[35m"
+ "{:^80}".format("=== [ ASTROBS TOOLS ] ===")
+"\033[0m")
first = False
print("\033[32m"
+ "Please select a tool:"
+ "\033[0m")
print("\033[32m"
+ "\tSCOPE: "
+ "\033[0m"
+ "Sky Coordinates for Observations Python Estimator")
print("\033[32m"
+ "\tEQUATOR: "
+ "\033[0m"
+ "Equator Queries simbAd to create Tables of Objects")
choice = input("\033[32m" + "Choice: " + "\033[0m")
if choice.upper() in DONE + ["", " "]:
None
elif choice.upper() in SCOPE:
print("\033[35m"
+ "{:^80}".format("=== [ SCOPE ] ===")
+"\033[0m")
first = True
SCOPE_v2_2.main()
elif choice.upper() in EQUATOR:
print("\033[35m"
+ "{:^80}".format("=== [ EQUATOR ] ===")
+"\033[0m")
first = True
EQUATOR_v1_1.main()
elif choice.upper() in QUIT:
stop = True
else:
print("\033[93m"
+ "Warning: {} is not recognized".format(choice)
+ "\033[0m")

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"""
* EQUATOR: Equator Queries simbAd to create Tables of Objects
* Version 1 - 2024-09-21
@ Yaël Moussouni
@ Observatory of Strasbourg
"""
import astrobs_v1_toolbox as toolbox
import numpy as np
import os
YES = ["YES", "Y", "1"]
QUIT = ["QUIT", "EXIT", "Q"]
OUT_DIR = "./Output/"
# TODO objects --> targets!
# TODO https://astroquery.readthedocs.io/en/latest/imcce/imcce.html#miriade-ephemeris-service
def main():
stop = False
targets = toolbox.create_table()
try:
files = os.listdir(OUT_DIR)
files = np.sort([file[:-4] for file in files if file[-4:] == ".cfg"])
print("\033[32m"
+ "Please select a configurations:"
+ "\033[0m")
for i in range(len(files)):
print("\033[32m"
+ "\t{}. ".format(i+1)
+ "\033[0m"
+ files[i])
selection = int(input("\033[32m"
+ "Choice: "
+ "\033[0m"))-1
if selection > len(files):
selection = -1
print("\033[93m"
+ ("Warning: Configuration unavailable, "
"selected the last one instead.")
+ "\033[0m")
config_name = files[selection]
config = toolbox.read_cfg(config_name)
except Exception as e:
config = toolbox.read_cfg(" ")
while not stop:
ans = input("\033[32m"
+ "Select an operation: "
+ "\033[0m")
if ans.upper() in QUIT:
stop = True
toolbox.resolve_input(ans, targets, config)
targets.pprint()
return 0
if __name__ == "__main__":
main()

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"""
* SCOPE: Sky Coordinates for Observations Python Estimator
* Version 2.1 - 2024-09-21
@ Yaël Moussouni
@ Observatory of Strasbourg
"""
import astropy.time as time
import astropy.coordinates as coord
import astropy.units as u
YES = ["YES", "Y", "1"]
OUT_DIR = "./Output/"
# Definitions
def get_sun(sun_time, sun_frame, angle, reverse=False):
i = 0
while coord.get_sun(sun_time).transform_to(sun_frame).alt.value > angle:
if reverse:
sun_time -= 1 * u.min
else:
sun_time += 1 * u.min
i += 1
if i > 60*24:
print("\033[93m"
+ "Warning: Sun did not reached the expected angle."
+ "\033[0m")
return time.Time("1970-01-01T12:00") # Error date
return sun_time
# Locations
available_obs = ["Observatoire astronomique de Strasbourg (ObAS)",
"Observatoire de Haute-Provence (OHP)"]
available_obs_short = ["ObAS",
"OHP"]
available_obs_lat = [coord.Latitude("""48d34m59s"""),
coord.Latitude("""43d55m53s""")]
available_obs_lon = [coord.Longitude("""07d46m07s"""),
coord.Longitude("""5d42m45s""")]
def main():
try:
print("\033[32m"+ "Please select a location:"+"\033[0m")
for i in range(len(available_obs)):
print("\033[32m"+ "\t{}. ".format(i+1)+"\033[0m"+available_obs[i]+".")
selection = int(input("\033[32m"+ "Choice: "+"\033[0m"))-1
if selection >= len(available_obs):
selection = -1
print("\033[93m"
+ ("Warning: Location unavailable, "
"selected the last one instead.")
+ "\033[0m")
except:
selection = -1
print("\033[91m"
+ ("Error! Input value not recognized, "
"selected the last location instead")
+ "\033[0m")
obs_name = available_obs[selection]
obs_short = available_obs_short[selection]
obs_lat = available_obs_lat[selection]
obs_lon = available_obs_lon[selection]
obs_loc = coord.EarthLocation(lon=obs_lon, lat=obs_lat)
# Date and time
try:
obs_date = input("\033[32m"
+ "Date of observation [YYYY-MM-DD]: "
+ "\033[0m")
test_date = time.Time(obs_date)
except:
obs_date = time.Time("1970-01-01", format="iso").now()
obs_date = obs_date.to_string()[0:10]
print("\033[91m"
+ "Error! Input value not recognized, selected today instead"
+ "\033[0m")
else:
del test_date
print("\033[34m" + "Computing Sun position..." + "\033[0m")
sun_frame = coord.AltAz(location=obs_loc)
sun_time = time.Time(obs_date + " 12:00:00", scale="utc")
sun_set = get_sun(sun_time, sun_frame, 0)
sun_civil = get_sun(sun_set, sun_frame, -6)
sun_nautical = get_sun(sun_civil, sun_frame, -12)
sun_astronomical = get_sun(sun_nautical, sun_frame, -18)
sun_time = time.Time(obs_date + " 12:00:00", scale="utc") + 1 * u.day
sun_rise = get_sun(sun_time, sun_frame, 0, reverse=True)
sun_rcivil = get_sun(sun_rise, sun_frame, -6, reverse=True)
sun_rnautical = get_sun(sun_rcivil, sun_frame, -12, reverse=True)
sun_rastronomical = get_sun(sun_rnautical, sun_frame, -18, reverse=True)
print("\033[34m" + "done!" + "\033[0m")
print("\033[36m"
+ "Night time [UTC]:"
+ "\033[0m")
print("\033[36m"
+ "\t === Evening === "
+ "\033[0m")
print("\033[36m"
+ "\t sunset: "
+ "\033[0m"
+sun_set.to_string())
print("\033[36m"
+ "\t civil twilight: "
+ "\033[0m"
+sun_civil.to_string())
print("\033[36m"
+ "\t nautical twilight: "
+ "\033[0m"
+sun_nautical.to_string())
print("\033[36m"
+ "\tastronomical twilight: "
+ "\033[0m"
+sun_astronomical.to_string())
print("\033[36m"
+ "\t === Morning === "
+ "\033[0m")
print("\033[36m"
+ "\tastronomical twilight: "
+ "\033[0m"
+sun_rastronomical.to_string())
print("\033[36m"
+ "\t nautical twilight: "
+ "\033[0m"
+sun_rnautical.to_string())
print("\033[36m"
+ "\t civil twilight: "
+ "\033[0m"
+sun_rcivil.to_string())
print("\033[36m"
+ "\t sunrise: "
+ "\033[0m"
+sun_rise.to_string())
obs_begin = input("\033[32m"
+ "Begin time of observation [hh:mm format; UTC]: "
+ "\033[0m")
obs_end = input("\033[32m"
+ " End time of observation [hh:mm format; UTC]: "
+ "\033[0m")
if obs_begin == "set" or obs_begin == "rise":
obs_begin_time = sun_set
elif obs_begin == "civil":
obs_begin_time = sun_civil
elif obs_begin == "nautical":
obs_begin_time = sun_nautical
elif obs_begin == "astronomical" or obs_begin == "auto" or obs_begin == "":
obs_begin_time = sun_astronomical
else:
try:
obs_begin_time = time.Time(obs_date + " " + obs_begin, scale="utc")
except:
obs_begin_time = sun_astronomical
print("\033[91m"
+ ("Error! Input value not recognized, "
"selected astronomical twilight instead.")
+ "\033[0m")
if obs_end == "set" or obs_end == "rise":
obs_end_time = sun_rise
elif obs_end == "civil":
obs_end_time = sun_rcivil
elif obs_end == "nautical":
obs_end_time = sun_rnautical
elif obs_end == "astronomical" or obs_end == "auto" or obs_end == "":
obs_end_time = sun_rastronomical
else:
try:
obs_end_time = time.Time(obs_date + " " + obs_end, scale="utc")
except:
obs_end_time = sun_rastronomical
print("\033[91m"
+ ("Error! Input value not recognized, "
"selected astronomical twilight instead.")
+ "\033[0m")
if obs_end_time.value < obs_begin_time.value:
obs_end_time += 1*u.day
obs_duration = obs_end_time - obs_begin_time
# Coordinates
print("\033[36m"
+ "Observation constraints"
+ "\033[0m")
try:
min_alt = coord.Angle(
input("\033[32m"
+ " Minimum altitude above horizon [deg]: "
+ "\033[0m")
+ "d")
except:
min_alt = coord.Angle(50 * u.deg)
print("\033[91m"
+ "Error! Input value not recognized, selected 50° instead."
+ "\033[0m")
try:
min_dec = coord.Angle(
input("\033[32m"
+ " Minimum declination around the north [deg]: "
+ "\033[0m")
+ "d")
except:
min_dec = coord.Angle(30 * u.deg)
print("\033[91m"
+ "Error! Input value not recognized, selected 30° instead."
+ "\033[0m")
try:
window_east = coord.Angle(
input("\033[32m"
+ "Observation window before crossing meridian [h]: "
+ "\033[0m")
+ " hours")
except:
window_east = coord.Angle(4 * u.h)
print("\033[91m"
+ "Error! Input value not recognized, selected 4h instead."
+ "\033[0m")
try:
window_west = coord.Angle(
input("\033[32m"
+ " Observation window after crossing meridian [h]: "
+ "\033[0m")
+ " hours")
except:
window_west = coord.Angle(2 * u.h)
print("\033[91m"
+ "Error! Input value not recognized, selected 2h instead."
+ "\033[0m")
obs_sky_rotation = coord.Angle(
"{} hours".format(obs_duration.to_value("h")))\
* (1*u.sday/u.day).decompose()
# * Date/time/location objects
obs = time.Time(obs_begin_time, location=obs_loc)
# * Local sidereal time
st = obs.sidereal_time("apparent") # ? apparent or absolute
# * Borders and corners coordinates
dec_upper = (90*u.deg-min_dec).wrap_at(360*u.deg)
dec_lower = (min_alt + obs_loc.lat - 90*u.deg).wrap_at(180*u.deg)
a_west = (st + obs_sky_rotation + window_west).wrap_at(24*u.h)
a_east = (st - window_east).wrap_at(24*u.h)
if a_east.degree <= a_west.degree:
comp_symb = "&&"
comp_text = "AND"
else:
comp_symb = "||"
comp_text = "OR"
# * Output
print("")
print("\033[36m"
+ "Location: "
+ "\033[0m"
+ obs_name)
print("\033[36m"
+ "\tlat: "
+ "\033[0m"
+ obs_lat.to_string())
print("\033[36m"
+ "\tlon: "
+ "\033[0m"
+ obs_lon.to_string())
print("\033[36m"
+ "Observation"
+ "\033[0m")
print("\033[36m"
+ "\tbegin date and time: "
+ "\033[0m"
+ obs_begin_time.to_string())
print("\033[36m"
+ "\t end date and time: "
+ "\033[0m"
+ obs_end_time.to_string())
print("\033[36m"
+ "\tbegin sidereal time: "
+ "\033[0m"
+ st.to_string(unit=u.hour))
print("\033[36m"
+ "\t end sidereal time: "
+ "\033[0m"
+ (st + obs_sky_rotation).wrap_at(24*u.h).to_string(unit=u.hour))
print("\033[36m"
+ "\t sky rotation: "
+ "\033[0m"
+ obs_sky_rotation.to_string(unit=u.hour))
print("\033[36m"
+ "Sky coordinates window"
+ "\033[0m")
print("\033[36m"
+ "\t east ra: "
+ "\033[0m"
+ a_east.to_string(unit=u.hour))
print("\033[36m"
+ "\t west ra: "
+ "\033[0m"
+ a_west.to_string(unit=u.hour))
print("\033[36m"
+ "\tupper dec: "
+ "\033[0m"
+ dec_upper.to_string(unit=u.degree))
print("\033[36m"
+ "\tlower dec: "
+ "\033[0m"
+ dec_lower.to_string(unit=u.degree))
print("\033[36m"
+ "Simbad query constraints: "
+ "\033[0m"
+ "WHERE (ra < {} {} ra > {}) AND (dec < {} AND dec > {}))".format(
a_west.degree,
comp_text,
a_east.degree,
dec_upper.degree,
dec_lower.degree))
print("\033[36m"
+ "Vizier query constraints:"
+ "\033[0m")
print("\033[36m"
+ "\tRA: "
+ "\033[0m"
+ "< "
+ a_west.to_string(unit=u.hour, sep=":")
+ " {} ".format(comp_symb)
+ "> "
+ a_east.to_string(unit=u.hour, sep=":"))
print("\033[36m"
+ "\tDE: "
+ "\033[0m"
+ "< "
+ dec_upper.to_string(unit=u.degree, sep=":")
+ " && "
+ "> "
+ dec_lower.to_string(unit=u.degree, sep=":"))
print("")
print("\033[32m"
+ "Write output to file ? [yes/no]"
+ "\033[0m")
write_output = input("\033[32m"
+ "Choice: "
+ "\033[0m").upper() in YES
if write_output:
try:
with open("{}{}_{}.cfg".format(OUT_DIR, obs_date, obs_short),
"w+") as file:
file.write("# File generated with SCOPE_v2\n")
file.write("LOCATION: ")
file.write(obs_short + "\n")
file.write("LAT: ")
file.write(obs_lat.to_string() + "\n")
file.write("LON: ")
file.write(obs_lon.to_string() + "\n")
file.write("SUN_SET: ")
file.write(sun_set.to_string() + "\n")
file.write("SUN_SET_CIVIL: ")
file.write(sun_civil.to_string() + "\n")
file.write("SUN_SET_NAUTICAL: ")
file.write(sun_nautical.to_string() + "\n")
file.write("SUN_SET_ASTRONOMICAL: ")
file.write(sun_astronomical.to_string() + "\n")
file.write("SUN_RISE_ASTRONOMICAL: ")
file.write(sun_rastronomical.to_string() + "\n")
file.write("SUN_RISE_NAUTICAL: ")
file.write(sun_rnautical.to_string() + "\n")
file.write("SUN_RISE_CIVIL: ")
file.write(sun_rcivil.to_string() + "\n")
file.write("SUN_RISE: ")
file.write(sun_rise.to_string() + "\n")
file.write("OBS_BEGIN: ")
file.write(obs_begin_time.to_string() + "\n")
file.write("OBS_END: ")
file.write(obs_end_time.to_string() + "\n")
file.write("ST_BEGIN: ")
file.write(st.to_string(unit=u.hour) + "\n")
file.write("ST_END: ")
file.write((st + obs_sky_rotation).wrap_at(
24*u.h).to_string(unit=u.hour) + "\n")
file.write("WINDOW_EAST: ")
file.write(a_east.to_string(unit=u.hour) + "\n")
file.write("WINDOW_WEST: ")
file.write(a_west.to_string(unit=u.hour) + "\n")
file.write("WINDOW_UPPER: ")
file.write(dec_upper.to_string(unit=u.degree) + "\n")
file.write("WINDOW_LOWER: ")
file.write(dec_lower.to_string(unit=u.degree) + "\n")
print("\033[34m"
+ "File saved in the {} directory ".format(OUT_DIR)
+ "with the name {}_{}.cfg".format(obs_date, obs_short)
+ "\033[0m")
print("\033[34m" + "done!" + "\033[0m")
except:
print("\033[91m"
+ "Error! File cannot be save in the output directory."
+ "\033[0m")
return 0
if __name__ == "__main__":
main()

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"""
* Astrobs Toolbox
* Version 1 - 2024-09-21
@ Yaël Moussouni
@ Observatory of Strasbourg
"""
import numpy as np
import astropy.time as time
import astropy.coordinates as coord
import astropy.units as u
from astropy.table import Table
from astroquery.simbad import Simbad
SPECIAL = ["CALIBRATION", "IGNORE"]
YES = ["YES", "Y", "1"]
ALL = ["ALL", "*"]
DONE = ["DONE", "OK"]
QUIT = ["QUIT", "EXIT", "Q"]
CANCEL = ["CANCEL", "BACK"]
WRITE = ["WRITE", "SAVE"]
READ = ["READ", "OPEN"]
CALIB = ["CALIB", "CALIBRATION"]
SIMBAD = ["SIMBAD", "OBJECT"]
REGION = ["SEARCH", "REGION"]
ST = ["SIDEREAL", "ST"]
SEQ = ["SEQUENCE", "SEQ"]
CHECK = ["CHECK"]
OUT_DIR = "./Output/"
DEFAULT_CONFIG = """# Default config
LOCATION: None
LAT: 0d00m00s
LON: 0d00m00s
SUN_SET: 1970-01-01 12:00:00.000
SUN_SET_CIVIL: 1970-01-01 12:00:00.000
SUN_SET_NAUTICAL: 1970-01-01 12:00:00.000
SUN_SET_ASTRONOMICAL: 1970-01-01 12:00:00.000
SUN_RISE_ASTRONOMICAL: 1970-01-01 12:00:00.000
SUN_RISE_NAUTICAL: 1970-01-01 12:00:00.000
SUN_RISE_CIVIL: 1970-01-01 12:00:00.000
SUN_RISE: 1970-01-01 12:00:00.000
OBS_BEGIN: 1970-01-01 12:00:00.000
OBS_END: 1970-01-01 12:00:00.000
ST_BEGIN: 12h00m0s
ST_END: 12h00m00s
WINDOW_EAST: 0h00m00s
WINDOW_WEST: 23h59m59s
WINDOW_UPPER: 90d00m00s
WINDOW_LOWER: -90d00m00s
"""
COLS = ["seq",
"name",
"main_id",
"ra",
"dec",
"n_exp",
"t_exp",
"st_begin",
"st_end",
"notes"]
UNITS = ["", # SEQ
"", # NAME
"", # MAIN_ID
"h", # RA
"deg", # DEC
"", # N_EXP
"s", # T_EXP
"h", # ST_BEGIN
"deg", # ST_END
""]
TYPES = [np.int_, # SEQ
np.str_("<U64"), # NAME
np.str_("<U64"), # MAIN_ID
coord.angles.core.Angle, # RA
coord.angles.core.Angle, # DEC
np.int_, # N_EXP
u.quantity.Quantity, # T_EXP
coord.angles.core.Angle, # ST_BEGIN
coord.angles.core.Angle, # ST_END
np.str_("<U512")]
def check_window(table: Table,
config: dict,
i: np.int_ = None) -> np.bool_:
def check_operation_(line, config):
if line["main_id"] in SPECIAL:
return True
if line["ra"] == "":
return True
if line["dec"] == "":
return True
ra = coord.Angle(line["ra"])
dec = coord.Angle(line["dec"])
east = coord.Angle(config["WINDOW_EAST"])
west = coord.Angle(config["WINDOW_WEST"])
upper = coord.Angle(config["WINDOW_UPPER"])
lower = coord.Angle(config["WINDOW_LOWER"])
if east <= west:
if ra < east or ra > west:
print("\033[93m"
+("Warning: The target {} "
"is outside the observation window.").format(
line["name"])
+"\033[0m")
return False
else:
if ra < east and ra > west:
print("\033[93m"
+("Warning: The target {} "
"is outside the observation window.").format(
line["name"])
+"\033[0m")
return False
if dec < lower or dec > upper:
print("\033[93m"
+("Warning: The target {} "
"is outside the observation window.").format(
line["name"])
+"\033[0m")
return False
return True
if i == None:
output = True
for i in range(len(table)):
val = check_operation_(table[i], config)
if val == False:
output = False
return output
else:
return check_operation_(table[i], config)
def create_table(cols: list = COLS,
units: list = UNITS,
types: list = TYPES) -> Table:
return Table(names=cols, dtype=types, units=units)
def select_obj(table: Table,
line: Table,
config: dict) -> Table:
table_old = table.copy()
for i in range(len(line)):
while line[i]["name"] in line[:i]["name"]:
line[i]["name"] = "*"+line[i]["name"]
line.pprint_all()
answer = "$"
print("\033[32m"
+ ("Select the name of the objects "
"you want to observe (column \"NAME\"):")
+ "\033[0m")
while answer.upper() not in DONE + [""]:
answer = input("\033[32m"
+ "> "
+ "\033[0m")
print("\033[A"
+ "\033[32m"
+ "> "
+ "\033[0m"
+ "\033[C"*len(answer),
end="")
if answer.upper() in DONE + [""]:
print("\033[34m"
+ " - ok"
+ "\033[0m")
elif answer.upper() in CANCEL or answer.upper() in QUIT:
i = 0
while i < len(table):
if table[i]["name"] not in table_old["name"]:
table.remove_row(i)
print("remove {}".format(i))
else: i+= 1
print("")
print("\033[34m"
+ "Operation canceled"
+ "\033[0m")
return table
elif answer in ALL:
for i in range(len(line)):
name = line[i]["name"]
while name in table["name"]:
name = "*" + name
table.add_row(line[i])
table[-1]["name"] = name
print("\033[34m"
+ " - ok"
+ "\033[0m")
elif answer in line["name"]:
i = np.argwhere(line["name"] == answer)[0][0]
name = line[i]["name"]
while name in table["name"]:
name = "*" + name
table.add_row(line[i])
table[-1]["name"] = name
print("\033[34m"
+ " - ok"
+ "\033[0m")
else:
print("\033[34m"
+ " - not found"
+ "\033[0m")
return table
def add_manual(table: Table,
config: dict,
seq: np.int_ = 0,
name: np.str_ = "",
main_id: np.str_ = "",
ra: coord.angles.core.Angle = None,
dec: coord.angles.core.Angle = None,
n_exp: np.int_ = 0,
t_exp: u.quantity.Quantity = 0*u.s,
obj_begin: coord.angles.core.Angle = None,
obj_end: coord.angles.core.Angle = None,
notes: np.str_ = "") -> Table:
while name in table["name"]: name = "*" + name
while seq > 0 and seq in table["seq"]: seq += 1
ra_str = ""
dec_str = ""
obj_begin_str = ""
obj_end_str = ""
if type(ra) == coord.angles.core.Angle:
ra_str = ra.to_string(unit=u.hour)
elif type(ra) == str:
ra_str = ra
if type(dec) == coord.angles.core.Angle:
dec_str = dec.to_string(unit=u.degree)
elif type(dec) == str:
dec_str = dec
if type(obj_begin) == coord.angles.core.Angle:
obj_begin_str = obj_begin.to_string()
elif type(obj_begin) == str:
obj_begin_str = obj_begin
if type(obj_end) == coord.angles.core.Angle:
obj_end_str = obj_end.to_string()
elif type(obj_end) == str:
obj_end_str = obj_end
table.add_row([seq,
name,
main_id,
ra_str,
dec_str,
n_exp,
t_exp.to_value(u.s),
obj_begin_str,
obj_end_str,
notes])
check_window(table, config, -1)
return table
def add_calib(table: Table,
config: dict = None,
seq: np.int_ = 0,
name: np.str_ = "CALIB",
n_exp: np.int_ = 0,
t_exp: u.quantity.Quantity = 0*u.s,
notes: np.str_ = "") -> Table:
while name in table["name"]:
name = "*" + name
while seq > 0 and seq in table["seq"]:
seq += 1
table.add_row([seq,
name,
"CALIBRATION",
"",
"",
n_exp,
t_exp.to_value(u.s),
"",
"",
notes])
check_window(table, config, -1)
return table
def add_simbad(table: Table,
obj: Table,
config: dict,
seq: np.int_ = 0,
name: np.str_ = "",
n_exp: np.int_ = 0,
t_exp: u.quantity.Quantity = 0*u.s,
obj_begin: coord.angles.core.Angle = None,
obj_end: coord.angles.core.Angle = None,
notes: np.str_ = "") -> Table:
for i in range(len(obj)):
main_id = obj["main_id"][i]
if name == "":
name = main_id
while name in table["name"]:
name = "*" + name
while seq > 0 and seq in table["seq"]:
seq += 1
ra = coord.Angle(obj["ra"][i], unit=u.degree)
dec = coord.Angle(obj["dec"][i], unit=u.degree)
ra_str = ra.to_string(unit=u.hour)
dec_str = dec.to_string(unit=u.degree)
obj_begin_str = ""
obj_end_str = ""
if type(obj_begin) == coord.angles.core.Angle:
obj_begin_str = obj_begin.to_string()
elif type(obj_begin) == str:
obj_begin_str = obj_begin
if type(obj_end) == coord.angles.core.Angle:
obj_end_str = obj_end.to_string()
elif type(obj_end) == str:
obj_end_str = obj_end
table.add_row([seq,
name,
main_id,
ra_str,
dec_str,
n_exp,
t_exp.to_value(u.s),
obj_begin_str,
obj_end_str,
notes])
name = ""
check_window(table, config)
return table
def read_cfg(filename:str,
directory:str = OUT_DIR,
extension:str = ".cfg") -> dict:
if directory[-1] != "/": directory += "/"
if extension[0] != ".": extension = "." + extension
try:
with open(directory+filename+extension, "r") as file:
params_index = []
params_value = []
for line in file.readlines():
if len(line) > 0:
if line[0] != "#":
params = line.strip().split(": ")
params_index.append(params[0])
params_value.append(params[1])
config = {params_index[i]:params_value[i]
for i in range(len(params_index))}
except:
print("\033[93m"
+ "Warning: No configuration file, using default."
+ "\033[0m")
if True:
file = DEFAULT_CONFIG # file is a string
params_index = []
params_value = []
for line in file.split("\n"):
if len(line) > 0:
if line[0] != "#":
params = line.strip().split(": ")
params_index.append(params[0])
params_value.append(params[1])
config = {params_index[i]:params_value[i]
for i in range(len(params_index))}
return config
def set_st_window(table, config):
before = coord.Angle(config["ST_BEGIN"]) \
- coord.Angle(config["WINDOW_EAST"])
after = coord.Angle(config["WINDOW_WEST"]) \
- coord.Angle(config["ST_END"])
for i in range(len(table)):
if not table[i]["main_id"] in SPECIAL:
table[i]["st_begin"] = (coord.Angle(table[i]["ra"]) \
- before).wrap_at(24*u.h).to_string()
table[i]["st_end"] = (coord.Angle(table[i]["ra"]) \
+ after).wrap_at(24*u.h).to_string()
else:
continue
return table
def set_seq(table, config, stack=False):
window_east = coord.Angle(config["WINDOW_EAST"]).degree
window_west = coord.Angle(config["WINDOW_WEST"]).degree
dupl_seq = np.argwhere(
np.unique(table["seq"], return_counts=True)[1] > 1).flatten()
index_dupl = np.argwhere(np.any(
[table["seq"] == dupl_seq[i]
for i in range(len(dupl_seq))], axis=0)).flatten()
index_zero = np.argwhere(
table["seq"] == 0).flatten()
index_special = np.argwhere(np.any(
[table["main_id"] == SPECIAL[i]
for i in range(len(SPECIAL))], axis=0)).flatten()
index_nora = np.argwhere(table["ra"] == "").flatten()
index_yes = np.union1d(index_dupl, index_zero)
index_no = np.union1d(index_special, index_nora)
index = np.setdiff1d(index_yes, index_no)
order_table = table[index]
table["seq"][index] = np.full(len(index), 0)
order_table.add_columns(
[coord.Angle(order_table["ra"]).degree],
names=["RA_DEG"])
if window_east <= window_west:
order_table.sort("RA_DEG")
else :
w1 = np.argwhere(
order_table["RA_DEG"] > (window_east + window_west)/2)
w2 = np.argwhere(
order_table["RA_DEG"] <= (window_east + window_west)/2)
order = np.zeros(len(order_table))
order[w1] = 1
order[w2] = 2
order_table.add_columns(
[order],
names=["ORDER"])
order_table.sort("RA_DEG")
order_table.sort("ORDER")
i = 0
seq = 0
while i < len(order_table):
while seq in table["seq"]:
seq += 1
order_table["seq"][i] = seq
i += 1
seq += 1
table[index] = order_table
table.sort("seq")
while table[0]["seq"] < 0:
table.add_row(table[0])
table.remove_row(0)
if stack:
i = 0
while table[i]["seq"] >= 0:
table[i]["seq"] = i + 1
i += 1
i = -1
while table[i]["seq"] < 0:
table[i]["seq"] = i
i -= 1
return table
def swap(table, name_1, name_2):
if name_1 not in table["name"] or name_2 not in table["name"]:
print("\033[93m"
+"Warning: {} or {} cannot be found in the table.".format(
name_1,
name_2)
+"\033[0m")
return table
i = 0
seq_1 = 0
seq_2 = 0
while table[i]["name"] not in [name_1, name_2]:
i += 1
seq_1 = table[i]["seq"]
table.add_row(table[i])
j = i + 1
while table[j]["name"] not in [name_1, name_2]:
j += 1
seq_2 = table[j]["seq"]
table[i] = table[j]
table[j] = table[-1]
table[i]["seq"] = seq_1
table[j]["seq"] = seq_2
table.remove_row(-1)
return table
def write_table(table,
config,
filename=None,
extension=".xml",
format_="votable",
directory=OUT_DIR):
data = table.copy()
if directory[-1] != "/": directory += "/"
if extension[0] != ".": extension = "." + extension
if filename == None:
filename = "{}_{}".format(config["OBS_BEGIN"][:10],
config["LOCATION"])
try:
data.write(directory + filename + extension,
format=format_,
overwrite=True)
print("\033[34m"
+ "File saved in the {} directory ".format(directory)
+ "with the name {}".format(filename+extension)
+ "\033[0m")
except Exception as e:
print("\033[91m"
+ ("Error! File cannot be saved "
"in the {} directory").format(directory)
+ "\033[0m")
def read_table(filename,
table,
config,
extension=".xml",
format_="votable",
directory=OUT_DIR):
if directory[-1] != "/": directory += "/"
if extension[0] != ".": extension = "." + extension
if filename == None:
filename = "{}_{}".format(config["OBS_BEGIN"][:10],
config["LOCATION"])
try:
data = Table.read(directory + filename + extension,
format=format_)
for i in range(len(data)):
line = data[i]
if "name" in line.columns: name = line["name"]
else: name = "{}_{}".format(filename, i)
if "main_id" in line.columns: main_id = line["main_id"]
else: main_id = name
if "ra" in line.columns:
if "h" not in str(line["ra"]):
ra = coord.Angle("{}d".format(line["ra"])).to_string(unit=u.hour)
else: ra = line["ra"]
else: ra = ""
if "dec" in line.columns:
if "d" not in str(line["dec"]):
dec = coord.Angle("{}d".format(line["dec"])).to_string(unit=u.degree)
else: dec = line["dec"]
else: dec = ""
if "n_exp" in line.columns: n_exp = line["n_exp"]
else: n_exp = 0
if "t_exp" in line.columns: t_exp = line["t_exp"]
else: t_exp = 0.
if "st_begin" in line.columns: st_begin = line["st_begin"]
else: st_begin = ""
if "st_end" in line.columns: st_end = line["st_end"]
else: st_end = ""
if "notes" in line.columns: notes = line["notes"]
else: notes = ""
while name in table["name"]:
name = "*" + name
for col in line.columns:
if col not in COLS:
notes += " & {}: {}".format(col, line[col])
table.add_row({"seq": 0,
"name": name,
"main_id": main_id,
"ra": ra,
"dec": dec,
"n_exp": n_exp,
"t_exp": t_exp,
"st_begin": st_begin,
"st_end": st_end,
"notes": notes})
except Exception as e:
print("\033[91m"
+ ("Error! File cannot be loaded "
"from the {} directory").format(directory)
+ "\033[0m")
return create_table()
return table
def resolve_input(text, table, config):
swap_table = create_table()
args = text.split(" ")
try:
if args[0].upper() in DONE + ["", " "]:
None
elif args[0].upper() in WRITE: # TODO ajouter args
write_table(table, config)
elif args[0].upper() in READ: # TODO ajouter args
read_table(args[1], swap_table, config)
select_obj(table, swap_table, config)
elif args[0].upper() in SIMBAD:
name = " ".join(args[1:])
obj = Simbad.query_object(name)
swap_table = add_simbad(swap_table, obj, config, name=name)
select_obj(table, swap_table, config)
elif args[0].upper() in REGION:
name = " ".join(args[1]+" "+args[2])
region = coord.SkyCoord(ra=args[1], dec=args[2])
radius = coord.Angle(args[3])
obj = Simbad.query_region(region, radius)
swap_table = add_simbad(swap_table, obj, config)
select_obj(table, swap_table, config)
elif args[0].upper() in CALIB: # TODO ajouter args
add_calib(table, config)
elif args[0].upper() in ST:
set_st_window(table, config)
elif args[0].upper() in SEQ: # FIXME marche bien une fois mais pas deux ??
set_seq(table, config)
elif args[0].upper() in CHECK:
check_window(table, config)
elif args[0].upper() in QUIT:
None
else:
print("\033[93m"
+ ("Warning: {} is not recognized "
"as a valid keyword.").format(args[0])
+ "\033[0m")
except Exception as e:
print("\033[91m"
+ "Error: Your operation is not recognized".format(args[0])
+ "\033[0m")
return table

2
activate.sh Normal file
View File

@@ -0,0 +1,2 @@
#!/bin/bash
source "venv/bin/activate"

23
requirements.txt Normal file
View File

@@ -0,0 +1,23 @@
astropy==7.0.0
astropy-iers-data==0.2024.11.25.0.34.48
astroquery==0.4.7
beautifulsoup4==4.12.3
certifi==2024.8.30
charset-normalizer==3.4.0
html5lib==1.1
idna==3.10
jaraco.classes==3.4.0
jaraco.context==6.0.1
jaraco.functools==4.1.0
keyring==25.5.0
more-itertools==10.5.0
numpy==2.1.3
packaging==24.2
pyerfa==2.0.1.5
pyvo==1.6
PyYAML==6.0.2
requests==2.32.3
six==1.16.0
soupsieve==2.6
urllib3==2.2.3
webencodings==0.5.1