From 4a2ccf854c48d65cc03cb34557fbb0c5e7a7fbe3 Mon Sep 17 00:00:00 2001 From: Yael-II <154762804+Yael-II@users.noreply.github.com> Date: Thu, 28 Nov 2024 18:02:44 +0100 Subject: [PATCH] Some fresh air --- Astrobs-Tools.sh | 16 + LICENSE | 674 +++++++++++++++++++++++++++++++++++ README.md | 36 ++ Source/ASTROBS_SELECT_v1.py | 53 +++ Source/EQUATOR_v1_1.py | 57 +++ Source/SCOPE_v2_2.py | 407 +++++++++++++++++++++ Source/astrobs_v1_toolbox.py | 617 ++++++++++++++++++++++++++++++++ activate.sh | 2 + requirements.txt | 23 ++ 9 files changed, 1885 insertions(+) create mode 100755 Astrobs-Tools.sh create mode 100644 LICENSE create mode 100644 README.md create mode 100644 Source/ASTROBS_SELECT_v1.py create mode 100644 Source/EQUATOR_v1_1.py create mode 100755 Source/SCOPE_v2_2.py create mode 100644 Source/astrobs_v1_toolbox.py create mode 100644 activate.sh create mode 100644 requirements.txt diff --git a/Astrobs-Tools.sh b/Astrobs-Tools.sh new file mode 100755 index 0000000..0457de5 --- /dev/null +++ b/Astrobs-Tools.sh @@ -0,0 +1,16 @@ +#!/bin/bash + +source activate.sh +if ! command -v python3 2>&1 >/dev/null; then + printf "\033[91mError: Please install python3 or newer version\033[0m\n" +else + version=$(pip3 freeze | sed -r "s/==|\./ /g" | awk '$1 == "astropy" {print $2}') + if [ -z $version ]; then + printf "\033[91mError: Astropy 6.0 is required\033[0m\n" + elif [ $version -lt 6 ]; then + printf "\033[91mError: Please install astropy 6.0 or newer version\033[0m\n" + else + clear + python Source/ASTROBS_SELECT_v1.py + fi +fi diff --git a/LICENSE b/LICENSE new file mode 100644 index 0000000..f288702 --- /dev/null +++ b/LICENSE @@ -0,0 +1,674 @@ + GNU GENERAL PUBLIC LICENSE + Version 3, 29 June 2007 + + Copyright (C) 2007 Free Software Foundation, Inc. + Everyone is permitted to copy and distribute verbatim copies + of this license document, but changing it is not allowed. + + Preamble + + The GNU General Public License is a free, copyleft license for +software and other kinds of works. + + The licenses for most software and other practical works are designed +to take away your freedom to share and change the works. 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If not, see . + +Also add information on how to contact you by electronic and paper mail. + + If the program does terminal interaction, make it output a short +notice like this when it starts in an interactive mode: + + Copyright (C) + This program comes with ABSOLUTELY NO WARRANTY; for details type `show w'. + This is free software, and you are welcome to redistribute it + under certain conditions; type `show c' for details. + +The hypothetical commands `show w' and `show c' should show the appropriate +parts of the General Public License. Of course, your program's commands +might be different; for a GUI interface, you would use an "about box". + + You should also get your employer (if you work as a programmer) or school, +if any, to sign a "copyright disclaimer" for the program, if necessary. +For more information on this, and how to apply and follow the GNU GPL, see +. + + The GNU General Public License does not permit incorporating your program +into proprietary programs. If your program is a subroutine library, you +may consider it more useful to permit linking proprietary applications with +the library. If this is what you want to do, use the GNU Lesser General +Public License instead of this License. But first, please read +. diff --git a/README.md b/README.md new file mode 100644 index 0000000..65089f4 --- /dev/null +++ b/README.md @@ -0,0 +1,36 @@ +# Astronomical Observation Tools + +Astronomical Observation Tools (Astrobs Tools) is composed of: +- SCOPE: a code to get the sky coordinate limits from observation constraints; +- EQUATOR: a software to organize targets before observations. + + +## Requirements + +Astrobs Tools requires `Python 3.10` or newer + +## Setup + +First step is to initialize a virtual environment for the software with: +``` +python3 -m venv ./venv +``` + +Then install the required packages with: +``` +source activate.sh && pip install -r requirements.txt && deactivate +``` + +You may also require to authorize the execution of Astrobs Tools with: +``` +chmod u+x Astrobs-Tools.sh +``` + +## Usage + +To launch Astrobs tools, simply execute: +``` +./Astrobs-Tools.sh +``` + +To be continued... diff --git a/Source/ASTROBS_SELECT_v1.py b/Source/ASTROBS_SELECT_v1.py new file mode 100644 index 0000000..f87c783 --- /dev/null +++ b/Source/ASTROBS_SELECT_v1.py @@ -0,0 +1,53 @@ +import SCOPE_v2_2 +import EQUATOR_v1_1 + +QUIT = ["QUIT", "EXIT", "Q"] +DONE = ["DONE", "OK"] +SCOPE = ["SCOPE"] +EQUATOR = ["EQUATOR"] + +stop = False +first = True + + + +while not stop: + if first: + print("\033[35m" + + "{:^80}".format("=== [ ASTROBS TOOLS ] ===") + +"\033[0m") + first = False + print("\033[32m" + + "Please select a tool:" + + "\033[0m") + print("\033[32m" + + "\tSCOPE: " + + "\033[0m" + + "Sky Coordinates for Observations Python Estimator") + print("\033[32m" + + "\tEQUATOR: " + + "\033[0m" + + "Equator Queries simbAd to create Tables of Objects") + choice = input("\033[32m" + "Choice: " + "\033[0m") + + if choice.upper() in DONE + ["", " "]: + None + elif choice.upper() in SCOPE: + print("\033[35m" + + "{:^80}".format("=== [ SCOPE ] ===") + +"\033[0m") + first = True + SCOPE_v2_2.main() + elif choice.upper() in EQUATOR: + print("\033[35m" + + "{:^80}".format("=== [ EQUATOR ] ===") + +"\033[0m") + first = True + EQUATOR_v1_1.main() + elif choice.upper() in QUIT: + stop = True + else: + print("\033[93m" + + "Warning: {} is not recognized".format(choice) + + "\033[0m") + diff --git a/Source/EQUATOR_v1_1.py b/Source/EQUATOR_v1_1.py new file mode 100644 index 0000000..c55378c --- /dev/null +++ b/Source/EQUATOR_v1_1.py @@ -0,0 +1,57 @@ +""" +* EQUATOR: Equator Queries simbAd to create Tables of Objects +* Version 1 - 2024-09-21 +@ Yaël Moussouni +@ Observatory of Strasbourg +""" +import astrobs_v1_toolbox as toolbox +import numpy as np +import os + +YES = ["YES", "Y", "1"] +QUIT = ["QUIT", "EXIT", "Q"] +OUT_DIR = "./Output/" + + +# TODO objects --> targets! +# TODO https://astroquery.readthedocs.io/en/latest/imcce/imcce.html#miriade-ephemeris-service + +def main(): + stop = False + targets = toolbox.create_table() + try: + files = os.listdir(OUT_DIR) + files = np.sort([file[:-4] for file in files if file[-4:] == ".cfg"]) + print("\033[32m" + + "Please select a configurations:" + + "\033[0m") + for i in range(len(files)): + print("\033[32m" + + "\t{}. ".format(i+1) + + "\033[0m" + + files[i]) + selection = int(input("\033[32m" + + "Choice: " + + "\033[0m"))-1 + if selection > len(files): + selection = -1 + print("\033[93m" + + ("Warning: Configuration unavailable, " + "selected the last one instead.") + + "\033[0m") + config_name = files[selection] + config = toolbox.read_cfg(config_name) + except Exception as e: + config = toolbox.read_cfg(" ") + while not stop: + ans = input("\033[32m" + + "Select an operation: " + + "\033[0m") + if ans.upper() in QUIT: + stop = True + toolbox.resolve_input(ans, targets, config) + targets.pprint() + return 0 + +if __name__ == "__main__": + main() diff --git a/Source/SCOPE_v2_2.py b/Source/SCOPE_v2_2.py new file mode 100755 index 0000000..6162f0f --- /dev/null +++ b/Source/SCOPE_v2_2.py @@ -0,0 +1,407 @@ +""" +* SCOPE: Sky Coordinates for Observations Python Estimator +* Version 2.1 - 2024-09-21 +@ Yaël Moussouni +@ Observatory of Strasbourg +""" +import astropy.time as time +import astropy.coordinates as coord +import astropy.units as u + +YES = ["YES", "Y", "1"] +OUT_DIR = "./Output/" +# Definitions +def get_sun(sun_time, sun_frame, angle, reverse=False): + i = 0 + while coord.get_sun(sun_time).transform_to(sun_frame).alt.value > angle: + if reverse: + sun_time -= 1 * u.min + else: + sun_time += 1 * u.min + i += 1 + if i > 60*24: + print("\033[93m" + + "Warning: Sun did not reached the expected angle." + + "\033[0m") + return time.Time("1970-01-01T12:00") # Error date + return sun_time + +# Locations +available_obs = ["Observatoire astronomique de Strasbourg (ObAS)", + "Observatoire de Haute-Provence (OHP)"] +available_obs_short = ["ObAS", + "OHP"] +available_obs_lat = [coord.Latitude("""48d34m59s"""), + coord.Latitude("""43d55m53s""")] +available_obs_lon = [coord.Longitude("""07d46m07s"""), + coord.Longitude("""5d42m45s""")] + + +def main(): + try: + print("\033[32m"+ "Please select a location:"+"\033[0m") + for i in range(len(available_obs)): + print("\033[32m"+ "\t{}. ".format(i+1)+"\033[0m"+available_obs[i]+".") + selection = int(input("\033[32m"+ "Choice: "+"\033[0m"))-1 + if selection >= len(available_obs): + selection = -1 + print("\033[93m" + + ("Warning: Location unavailable, " + "selected the last one instead.") + + "\033[0m") + except: + selection = -1 + print("\033[91m" + + ("Error! Input value not recognized, " + "selected the last location instead") + + "\033[0m") + + obs_name = available_obs[selection] + obs_short = available_obs_short[selection] + obs_lat = available_obs_lat[selection] + obs_lon = available_obs_lon[selection] + obs_loc = coord.EarthLocation(lon=obs_lon, lat=obs_lat) + + # Date and time + try: + obs_date = input("\033[32m" + + "Date of observation [YYYY-MM-DD]: " + + "\033[0m") + test_date = time.Time(obs_date) + except: + obs_date = time.Time("1970-01-01", format="iso").now() + obs_date = obs_date.to_string()[0:10] + print("\033[91m" + + "Error! Input value not recognized, selected today instead" + + "\033[0m") + else: + del test_date + print("\033[34m" + "Computing Sun position..." + "\033[0m") + sun_frame = coord.AltAz(location=obs_loc) + sun_time = time.Time(obs_date + " 12:00:00", scale="utc") + + sun_set = get_sun(sun_time, sun_frame, 0) + sun_civil = get_sun(sun_set, sun_frame, -6) + sun_nautical = get_sun(sun_civil, sun_frame, -12) + sun_astronomical = get_sun(sun_nautical, sun_frame, -18) + + sun_time = time.Time(obs_date + " 12:00:00", scale="utc") + 1 * u.day + + sun_rise = get_sun(sun_time, sun_frame, 0, reverse=True) + sun_rcivil = get_sun(sun_rise, sun_frame, -6, reverse=True) + sun_rnautical = get_sun(sun_rcivil, sun_frame, -12, reverse=True) + sun_rastronomical = get_sun(sun_rnautical, sun_frame, -18, reverse=True) + print("\033[34m" + "done!" + "\033[0m") + + print("\033[36m" + + "Night time [UTC]:" + + "\033[0m") + print("\033[36m" + + "\t === Evening === " + + "\033[0m") + print("\033[36m" + + "\t sunset: " + + "\033[0m" + +sun_set.to_string()) + print("\033[36m" + + "\t civil twilight: " + + "\033[0m" + +sun_civil.to_string()) + print("\033[36m" + + "\t nautical twilight: " + + "\033[0m" + +sun_nautical.to_string()) + print("\033[36m" + + "\tastronomical twilight: " + + "\033[0m" + +sun_astronomical.to_string()) + print("\033[36m" + + "\t === Morning === " + + "\033[0m") + print("\033[36m" + + "\tastronomical twilight: " + + "\033[0m" + +sun_rastronomical.to_string()) + print("\033[36m" + + "\t nautical twilight: " + + "\033[0m" + +sun_rnautical.to_string()) + print("\033[36m" + + "\t civil twilight: " + + "\033[0m" + +sun_rcivil.to_string()) + print("\033[36m" + + "\t sunrise: " + + "\033[0m" + +sun_rise.to_string()) + + + obs_begin = input("\033[32m" + + "Begin time of observation [hh:mm format; UTC]: " + + "\033[0m") + obs_end = input("\033[32m" + + " End time of observation [hh:mm format; UTC]: " + + "\033[0m") + + if obs_begin == "set" or obs_begin == "rise": + obs_begin_time = sun_set + elif obs_begin == "civil": + obs_begin_time = sun_civil + elif obs_begin == "nautical": + obs_begin_time = sun_nautical + elif obs_begin == "astronomical" or obs_begin == "auto" or obs_begin == "": + obs_begin_time = sun_astronomical + else: + try: + obs_begin_time = time.Time(obs_date + " " + obs_begin, scale="utc") + except: + obs_begin_time = sun_astronomical + print("\033[91m" + + ("Error! Input value not recognized, " + "selected astronomical twilight instead.") + + "\033[0m") + + + if obs_end == "set" or obs_end == "rise": + obs_end_time = sun_rise + elif obs_end == "civil": + obs_end_time = sun_rcivil + elif obs_end == "nautical": + obs_end_time = sun_rnautical + elif obs_end == "astronomical" or obs_end == "auto" or obs_end == "": + obs_end_time = sun_rastronomical + else: + try: + obs_end_time = time.Time(obs_date + " " + obs_end, scale="utc") + except: + obs_end_time = sun_rastronomical + print("\033[91m" + + ("Error! Input value not recognized, " + "selected astronomical twilight instead.") + + "\033[0m") + + if obs_end_time.value < obs_begin_time.value: + obs_end_time += 1*u.day + + obs_duration = obs_end_time - obs_begin_time + + # Coordinates + + print("\033[36m" + + "Observation constraints" + + "\033[0m") + try: + min_alt = coord.Angle( + input("\033[32m" + + " Minimum altitude above horizon [deg]: " + + "\033[0m") + + "d") + except: + min_alt = coord.Angle(50 * u.deg) + print("\033[91m" + + "Error! Input value not recognized, selected 50° instead." + + "\033[0m") + try: + min_dec = coord.Angle( + input("\033[32m" + + " Minimum declination around the north [deg]: " + + "\033[0m") + + "d") + except: + min_dec = coord.Angle(30 * u.deg) + print("\033[91m" + + "Error! Input value not recognized, selected 30° instead." + + "\033[0m") + try: + window_east = coord.Angle( + input("\033[32m" + + "Observation window before crossing meridian [h]: " + + "\033[0m") + + " hours") + except: + window_east = coord.Angle(4 * u.h) + print("\033[91m" + + "Error! Input value not recognized, selected 4h instead." + + "\033[0m") + try: + window_west = coord.Angle( + input("\033[32m" + + " Observation window after crossing meridian [h]: " + + "\033[0m") + + " hours") + except: + window_west = coord.Angle(2 * u.h) + print("\033[91m" + + "Error! Input value not recognized, selected 2h instead." + + "\033[0m") + + obs_sky_rotation = coord.Angle( + "{} hours".format(obs_duration.to_value("h")))\ + * (1*u.sday/u.day).decompose() + + # * Date/time/location objects + obs = time.Time(obs_begin_time, location=obs_loc) + + # * Local sidereal time + st = obs.sidereal_time("apparent") # ? apparent or absolute + + # * Borders and corners coordinates + dec_upper = (90*u.deg-min_dec).wrap_at(360*u.deg) + dec_lower = (min_alt + obs_loc.lat - 90*u.deg).wrap_at(180*u.deg) + a_west = (st + obs_sky_rotation + window_west).wrap_at(24*u.h) + a_east = (st - window_east).wrap_at(24*u.h) + + if a_east.degree <= a_west.degree: + comp_symb = "&&" + comp_text = "AND" + else: + comp_symb = "||" + comp_text = "OR" + # * Output + print("") + print("\033[36m" + + "Location: " + + "\033[0m" + + obs_name) + print("\033[36m" + + "\tlat: " + + "\033[0m" + + obs_lat.to_string()) + print("\033[36m" + + "\tlon: " + + "\033[0m" + + obs_lon.to_string()) + print("\033[36m" + + "Observation" + + "\033[0m") + print("\033[36m" + + "\tbegin date and time: " + + "\033[0m" + + obs_begin_time.to_string()) + print("\033[36m" + + "\t end date and time: " + + "\033[0m" + + obs_end_time.to_string()) + print("\033[36m" + + "\tbegin sidereal time: " + + "\033[0m" + + st.to_string(unit=u.hour)) + print("\033[36m" + + "\t end sidereal time: " + + "\033[0m" + + (st + obs_sky_rotation).wrap_at(24*u.h).to_string(unit=u.hour)) + print("\033[36m" + + "\t sky rotation: " + + "\033[0m" + + obs_sky_rotation.to_string(unit=u.hour)) + print("\033[36m" + + "Sky coordinates window" + + "\033[0m") + print("\033[36m" + + "\t east ra: " + + "\033[0m" + + a_east.to_string(unit=u.hour)) + print("\033[36m" + + "\t west ra: " + + "\033[0m" + + a_west.to_string(unit=u.hour)) + print("\033[36m" + + "\tupper dec: " + + "\033[0m" + + dec_upper.to_string(unit=u.degree)) + print("\033[36m" + + "\tlower dec: " + + "\033[0m" + + dec_lower.to_string(unit=u.degree)) + print("\033[36m" + + "Simbad query constraints: " + + "\033[0m" + + "WHERE (ra < {} {} ra > {}) AND (dec < {} AND dec > {}))".format( + a_west.degree, + comp_text, + a_east.degree, + dec_upper.degree, + dec_lower.degree)) + print("\033[36m" + + "Vizier query constraints:" + + "\033[0m") + print("\033[36m" + + "\tRA: " + + "\033[0m" + + "< " + + a_west.to_string(unit=u.hour, sep=":") + + " {} ".format(comp_symb) + + "> " + + a_east.to_string(unit=u.hour, sep=":")) + print("\033[36m" + + "\tDE: " + + "\033[0m" + + "< " + + dec_upper.to_string(unit=u.degree, sep=":") + + " && " + + "> " + + dec_lower.to_string(unit=u.degree, sep=":")) + + print("") + print("\033[32m" + + "Write output to file ? [yes/no]" + + "\033[0m") + write_output = input("\033[32m" + + "Choice: " + + "\033[0m").upper() in YES + if write_output: + try: + with open("{}{}_{}.cfg".format(OUT_DIR, obs_date, obs_short), + "w+") as file: + file.write("# File generated with SCOPE_v2\n") + file.write("LOCATION: ") + file.write(obs_short + "\n") + file.write("LAT: ") + file.write(obs_lat.to_string() + "\n") + file.write("LON: ") + file.write(obs_lon.to_string() + "\n") + file.write("SUN_SET: ") + file.write(sun_set.to_string() + "\n") + file.write("SUN_SET_CIVIL: ") + file.write(sun_civil.to_string() + "\n") + file.write("SUN_SET_NAUTICAL: ") + file.write(sun_nautical.to_string() + "\n") + file.write("SUN_SET_ASTRONOMICAL: ") + file.write(sun_astronomical.to_string() + "\n") + file.write("SUN_RISE_ASTRONOMICAL: ") + file.write(sun_rastronomical.to_string() + "\n") + file.write("SUN_RISE_NAUTICAL: ") + file.write(sun_rnautical.to_string() + "\n") + file.write("SUN_RISE_CIVIL: ") + file.write(sun_rcivil.to_string() + "\n") + file.write("SUN_RISE: ") + file.write(sun_rise.to_string() + "\n") + file.write("OBS_BEGIN: ") + file.write(obs_begin_time.to_string() + "\n") + file.write("OBS_END: ") + file.write(obs_end_time.to_string() + "\n") + file.write("ST_BEGIN: ") + file.write(st.to_string(unit=u.hour) + "\n") + file.write("ST_END: ") + file.write((st + obs_sky_rotation).wrap_at( + 24*u.h).to_string(unit=u.hour) + "\n") + file.write("WINDOW_EAST: ") + file.write(a_east.to_string(unit=u.hour) + "\n") + file.write("WINDOW_WEST: ") + file.write(a_west.to_string(unit=u.hour) + "\n") + file.write("WINDOW_UPPER: ") + file.write(dec_upper.to_string(unit=u.degree) + "\n") + file.write("WINDOW_LOWER: ") + file.write(dec_lower.to_string(unit=u.degree) + "\n") + print("\033[34m" + + "File saved in the {} directory ".format(OUT_DIR) + + "with the name {}_{}.cfg".format(obs_date, obs_short) + + "\033[0m") + print("\033[34m" + "done!" + "\033[0m") + except: + print("\033[91m" + + "Error! File cannot be save in the output directory." + + "\033[0m") + return 0 +if __name__ == "__main__": + main() diff --git a/Source/astrobs_v1_toolbox.py b/Source/astrobs_v1_toolbox.py new file mode 100644 index 0000000..359cc15 --- /dev/null +++ b/Source/astrobs_v1_toolbox.py @@ -0,0 +1,617 @@ +""" +* Astrobs Toolbox +* Version 1 - 2024-09-21 +@ Yaël Moussouni +@ Observatory of Strasbourg +""" +import numpy as np +import astropy.time as time +import astropy.coordinates as coord +import astropy.units as u +from astropy.table import Table +from astroquery.simbad import Simbad + +SPECIAL = ["CALIBRATION", "IGNORE"] +YES = ["YES", "Y", "1"] +ALL = ["ALL", "*"] +DONE = ["DONE", "OK"] +QUIT = ["QUIT", "EXIT", "Q"] +CANCEL = ["CANCEL", "BACK"] +WRITE = ["WRITE", "SAVE"] +READ = ["READ", "OPEN"] +CALIB = ["CALIB", "CALIBRATION"] +SIMBAD = ["SIMBAD", "OBJECT"] +REGION = ["SEARCH", "REGION"] +ST = ["SIDEREAL", "ST"] +SEQ = ["SEQUENCE", "SEQ"] +CHECK = ["CHECK"] +OUT_DIR = "./Output/" +DEFAULT_CONFIG = """# Default config +LOCATION: None +LAT: 0d00m00s +LON: 0d00m00s +SUN_SET: 1970-01-01 12:00:00.000 +SUN_SET_CIVIL: 1970-01-01 12:00:00.000 +SUN_SET_NAUTICAL: 1970-01-01 12:00:00.000 +SUN_SET_ASTRONOMICAL: 1970-01-01 12:00:00.000 +SUN_RISE_ASTRONOMICAL: 1970-01-01 12:00:00.000 +SUN_RISE_NAUTICAL: 1970-01-01 12:00:00.000 +SUN_RISE_CIVIL: 1970-01-01 12:00:00.000 +SUN_RISE: 1970-01-01 12:00:00.000 +OBS_BEGIN: 1970-01-01 12:00:00.000 +OBS_END: 1970-01-01 12:00:00.000 +ST_BEGIN: 12h00m0s +ST_END: 12h00m00s +WINDOW_EAST: 0h00m00s +WINDOW_WEST: 23h59m59s +WINDOW_UPPER: 90d00m00s +WINDOW_LOWER: -90d00m00s +""" + +COLS = ["seq", + "name", + "main_id", + "ra", + "dec", + "n_exp", + "t_exp", + "st_begin", + "st_end", + "notes"] + +UNITS = ["", # SEQ + "", # NAME + "", # MAIN_ID + "h", # RA + "deg", # DEC + "", # N_EXP + "s", # T_EXP + "h", # ST_BEGIN + "deg", # ST_END + ""] + +TYPES = [np.int_, # SEQ + np.str_(" np.bool_: + def check_operation_(line, config): + if line["main_id"] in SPECIAL: + return True + if line["ra"] == "": + return True + if line["dec"] == "": + return True + ra = coord.Angle(line["ra"]) + dec = coord.Angle(line["dec"]) + east = coord.Angle(config["WINDOW_EAST"]) + west = coord.Angle(config["WINDOW_WEST"]) + upper = coord.Angle(config["WINDOW_UPPER"]) + lower = coord.Angle(config["WINDOW_LOWER"]) + if east <= west: + if ra < east or ra > west: + print("\033[93m" + +("Warning: The target {} " + "is outside the observation window.").format( + line["name"]) + +"\033[0m") + return False + else: + if ra < east and ra > west: + print("\033[93m" + +("Warning: The target {} " + "is outside the observation window.").format( + line["name"]) + +"\033[0m") + return False + if dec < lower or dec > upper: + print("\033[93m" + +("Warning: The target {} " + "is outside the observation window.").format( + line["name"]) + +"\033[0m") + return False + return True + if i == None: + output = True + for i in range(len(table)): + val = check_operation_(table[i], config) + if val == False: + output = False + return output + else: + return check_operation_(table[i], config) + +def create_table(cols: list = COLS, + units: list = UNITS, + types: list = TYPES) -> Table: + return Table(names=cols, dtype=types, units=units) + +def select_obj(table: Table, + line: Table, + config: dict) -> Table: + table_old = table.copy() + for i in range(len(line)): + while line[i]["name"] in line[:i]["name"]: + line[i]["name"] = "*"+line[i]["name"] + line.pprint_all() + answer = "$" + print("\033[32m" + + ("Select the name of the objects " + "you want to observe (column \"NAME\"):") + + "\033[0m") + while answer.upper() not in DONE + [""]: + answer = input("\033[32m" + + "> " + + "\033[0m") + print("\033[A" + + "\033[32m" + + "> " + + "\033[0m" + + "\033[C"*len(answer), + end="") + if answer.upper() in DONE + [""]: + print("\033[34m" + + " - ok" + + "\033[0m") + elif answer.upper() in CANCEL or answer.upper() in QUIT: + i = 0 + while i < len(table): + if table[i]["name"] not in table_old["name"]: + table.remove_row(i) + print("remove {}".format(i)) + else: i+= 1 + print("") + print("\033[34m" + + "Operation canceled" + + "\033[0m") + return table + elif answer in ALL: + for i in range(len(line)): + name = line[i]["name"] + while name in table["name"]: + name = "*" + name + table.add_row(line[i]) + table[-1]["name"] = name + print("\033[34m" + + " - ok" + + "\033[0m") + + elif answer in line["name"]: + i = np.argwhere(line["name"] == answer)[0][0] + name = line[i]["name"] + while name in table["name"]: + name = "*" + name + table.add_row(line[i]) + table[-1]["name"] = name + print("\033[34m" + + " - ok" + + "\033[0m") + else: + print("\033[34m" + + " - not found" + + "\033[0m") + return table + +def add_manual(table: Table, + config: dict, + seq: np.int_ = 0, + name: np.str_ = "", + main_id: np.str_ = "", + ra: coord.angles.core.Angle = None, + dec: coord.angles.core.Angle = None, + n_exp: np.int_ = 0, + t_exp: u.quantity.Quantity = 0*u.s, + obj_begin: coord.angles.core.Angle = None, + obj_end: coord.angles.core.Angle = None, + notes: np.str_ = "") -> Table: + + while name in table["name"]: name = "*" + name + while seq > 0 and seq in table["seq"]: seq += 1 + + ra_str = "" + dec_str = "" + obj_begin_str = "" + obj_end_str = "" + + if type(ra) == coord.angles.core.Angle: + ra_str = ra.to_string(unit=u.hour) + elif type(ra) == str: + ra_str = ra + + if type(dec) == coord.angles.core.Angle: + dec_str = dec.to_string(unit=u.degree) + elif type(dec) == str: + dec_str = dec + + if type(obj_begin) == coord.angles.core.Angle: + obj_begin_str = obj_begin.to_string() + elif type(obj_begin) == str: + obj_begin_str = obj_begin + + if type(obj_end) == coord.angles.core.Angle: + obj_end_str = obj_end.to_string() + elif type(obj_end) == str: + obj_end_str = obj_end + + table.add_row([seq, + name, + main_id, + ra_str, + dec_str, + n_exp, + t_exp.to_value(u.s), + obj_begin_str, + obj_end_str, + notes]) + check_window(table, config, -1) + return table + +def add_calib(table: Table, + config: dict = None, + seq: np.int_ = 0, + name: np.str_ = "CALIB", + n_exp: np.int_ = 0, + t_exp: u.quantity.Quantity = 0*u.s, + notes: np.str_ = "") -> Table: + + while name in table["name"]: + name = "*" + name + + while seq > 0 and seq in table["seq"]: + seq += 1 + + table.add_row([seq, + name, + "CALIBRATION", + "", + "", + n_exp, + t_exp.to_value(u.s), + "", + "", + notes]) + check_window(table, config, -1) + return table + +def add_simbad(table: Table, + obj: Table, + config: dict, + seq: np.int_ = 0, + name: np.str_ = "", + n_exp: np.int_ = 0, + t_exp: u.quantity.Quantity = 0*u.s, + obj_begin: coord.angles.core.Angle = None, + obj_end: coord.angles.core.Angle = None, + notes: np.str_ = "") -> Table: + for i in range(len(obj)): + main_id = obj["main_id"][i] + + if name == "": + name = main_id + + while name in table["name"]: + name = "*" + name + + while seq > 0 and seq in table["seq"]: + seq += 1 + + ra = coord.Angle(obj["ra"][i], unit=u.degree) + dec = coord.Angle(obj["dec"][i], unit=u.degree) + ra_str = ra.to_string(unit=u.hour) + dec_str = dec.to_string(unit=u.degree) + obj_begin_str = "" + obj_end_str = "" + + if type(obj_begin) == coord.angles.core.Angle: + obj_begin_str = obj_begin.to_string() + elif type(obj_begin) == str: + obj_begin_str = obj_begin + + if type(obj_end) == coord.angles.core.Angle: + obj_end_str = obj_end.to_string() + elif type(obj_end) == str: + obj_end_str = obj_end + + table.add_row([seq, + name, + main_id, + ra_str, + dec_str, + n_exp, + t_exp.to_value(u.s), + obj_begin_str, + obj_end_str, + notes]) + name = "" + check_window(table, config) + return table + +def read_cfg(filename:str, + directory:str = OUT_DIR, + extension:str = ".cfg") -> dict: + if directory[-1] != "/": directory += "/" + if extension[0] != ".": extension = "." + extension + try: + with open(directory+filename+extension, "r") as file: + params_index = [] + params_value = [] + for line in file.readlines(): + if len(line) > 0: + if line[0] != "#": + params = line.strip().split(": ") + params_index.append(params[0]) + params_value.append(params[1]) + config = {params_index[i]:params_value[i] + for i in range(len(params_index))} + except: + print("\033[93m" + + "Warning: No configuration file, using default." + + "\033[0m") + if True: + file = DEFAULT_CONFIG # file is a string + params_index = [] + params_value = [] + for line in file.split("\n"): + if len(line) > 0: + if line[0] != "#": + params = line.strip().split(": ") + params_index.append(params[0]) + params_value.append(params[1]) + config = {params_index[i]:params_value[i] + for i in range(len(params_index))} + + + + + return config + +def set_st_window(table, config): + before = coord.Angle(config["ST_BEGIN"]) \ + - coord.Angle(config["WINDOW_EAST"]) + after = coord.Angle(config["WINDOW_WEST"]) \ + - coord.Angle(config["ST_END"]) + for i in range(len(table)): + if not table[i]["main_id"] in SPECIAL: + table[i]["st_begin"] = (coord.Angle(table[i]["ra"]) \ + - before).wrap_at(24*u.h).to_string() + table[i]["st_end"] = (coord.Angle(table[i]["ra"]) \ + + after).wrap_at(24*u.h).to_string() + else: + continue + return table + +def set_seq(table, config, stack=False): + window_east = coord.Angle(config["WINDOW_EAST"]).degree + window_west = coord.Angle(config["WINDOW_WEST"]).degree + dupl_seq = np.argwhere( + np.unique(table["seq"], return_counts=True)[1] > 1).flatten() + index_dupl = np.argwhere(np.any( + [table["seq"] == dupl_seq[i] + for i in range(len(dupl_seq))], axis=0)).flatten() + index_zero = np.argwhere( + table["seq"] == 0).flatten() + index_special = np.argwhere(np.any( + [table["main_id"] == SPECIAL[i] + for i in range(len(SPECIAL))], axis=0)).flatten() + index_nora = np.argwhere(table["ra"] == "").flatten() + index_yes = np.union1d(index_dupl, index_zero) + index_no = np.union1d(index_special, index_nora) + index = np.setdiff1d(index_yes, index_no) + order_table = table[index] + table["seq"][index] = np.full(len(index), 0) + order_table.add_columns( + [coord.Angle(order_table["ra"]).degree], + names=["RA_DEG"]) + if window_east <= window_west: + order_table.sort("RA_DEG") + else : + w1 = np.argwhere( + order_table["RA_DEG"] > (window_east + window_west)/2) + w2 = np.argwhere( + order_table["RA_DEG"] <= (window_east + window_west)/2) + order = np.zeros(len(order_table)) + order[w1] = 1 + order[w2] = 2 + order_table.add_columns( + [order], + names=["ORDER"]) + order_table.sort("RA_DEG") + order_table.sort("ORDER") + i = 0 + seq = 0 + while i < len(order_table): + while seq in table["seq"]: + seq += 1 + order_table["seq"][i] = seq + i += 1 + seq += 1 + table[index] = order_table + table.sort("seq") + while table[0]["seq"] < 0: + table.add_row(table[0]) + table.remove_row(0) + if stack: + i = 0 + while table[i]["seq"] >= 0: + table[i]["seq"] = i + 1 + i += 1 + i = -1 + while table[i]["seq"] < 0: + table[i]["seq"] = i + i -= 1 + return table + +def swap(table, name_1, name_2): + if name_1 not in table["name"] or name_2 not in table["name"]: + print("\033[93m" + +"Warning: {} or {} cannot be found in the table.".format( + name_1, + name_2) + +"\033[0m") + return table + i = 0 + seq_1 = 0 + seq_2 = 0 + while table[i]["name"] not in [name_1, name_2]: + i += 1 + seq_1 = table[i]["seq"] + table.add_row(table[i]) + j = i + 1 + while table[j]["name"] not in [name_1, name_2]: + j += 1 + seq_2 = table[j]["seq"] + table[i] = table[j] + table[j] = table[-1] + table[i]["seq"] = seq_1 + table[j]["seq"] = seq_2 + table.remove_row(-1) + return table + +def write_table(table, + config, + filename=None, + extension=".xml", + format_="votable", + directory=OUT_DIR): + data = table.copy() + if directory[-1] != "/": directory += "/" + if extension[0] != ".": extension = "." + extension + if filename == None: + filename = "{}_{}".format(config["OBS_BEGIN"][:10], + config["LOCATION"]) + try: + data.write(directory + filename + extension, + format=format_, + overwrite=True) + print("\033[34m" + + "File saved in the {} directory ".format(directory) + + "with the name {}".format(filename+extension) + + "\033[0m") + except Exception as e: + print("\033[91m" + + ("Error! File cannot be saved " + "in the {} directory").format(directory) + + "\033[0m") + +def read_table(filename, + table, + config, + extension=".xml", + format_="votable", + directory=OUT_DIR): + if directory[-1] != "/": directory += "/" + if extension[0] != ".": extension = "." + extension + if filename == None: + filename = "{}_{}".format(config["OBS_BEGIN"][:10], + config["LOCATION"]) + try: + data = Table.read(directory + filename + extension, + format=format_) + for i in range(len(data)): + line = data[i] + if "name" in line.columns: name = line["name"] + else: name = "{}_{}".format(filename, i) + if "main_id" in line.columns: main_id = line["main_id"] + else: main_id = name + if "ra" in line.columns: + if "h" not in str(line["ra"]): + ra = coord.Angle("{}d".format(line["ra"])).to_string(unit=u.hour) + else: ra = line["ra"] + else: ra = "" + if "dec" in line.columns: + if "d" not in str(line["dec"]): + dec = coord.Angle("{}d".format(line["dec"])).to_string(unit=u.degree) + else: dec = line["dec"] + else: dec = "" + if "n_exp" in line.columns: n_exp = line["n_exp"] + else: n_exp = 0 + if "t_exp" in line.columns: t_exp = line["t_exp"] + else: t_exp = 0. + if "st_begin" in line.columns: st_begin = line["st_begin"] + else: st_begin = "" + if "st_end" in line.columns: st_end = line["st_end"] + else: st_end = "" + if "notes" in line.columns: notes = line["notes"] + else: notes = "" + while name in table["name"]: + name = "*" + name + + for col in line.columns: + if col not in COLS: + notes += " & {}: {}".format(col, line[col]) + + table.add_row({"seq": 0, + "name": name, + "main_id": main_id, + "ra": ra, + "dec": dec, + "n_exp": n_exp, + "t_exp": t_exp, + "st_begin": st_begin, + "st_end": st_end, + "notes": notes}) + + except Exception as e: + print("\033[91m" + + ("Error! File cannot be loaded " + "from the {} directory").format(directory) + + "\033[0m") + return create_table() + return table + +def resolve_input(text, table, config): + swap_table = create_table() + args = text.split(" ") + try: + if args[0].upper() in DONE + ["", " "]: + None + elif args[0].upper() in WRITE: # TODO ajouter args + write_table(table, config) + elif args[0].upper() in READ: # TODO ajouter args + read_table(args[1], swap_table, config) + select_obj(table, swap_table, config) + elif args[0].upper() in SIMBAD: + name = " ".join(args[1:]) + obj = Simbad.query_object(name) + swap_table = add_simbad(swap_table, obj, config, name=name) + select_obj(table, swap_table, config) + elif args[0].upper() in REGION: + name = " ".join(args[1]+" "+args[2]) + region = coord.SkyCoord(ra=args[1], dec=args[2]) + radius = coord.Angle(args[3]) + obj = Simbad.query_region(region, radius) + swap_table = add_simbad(swap_table, obj, config) + select_obj(table, swap_table, config) + elif args[0].upper() in CALIB: # TODO ajouter args + add_calib(table, config) + elif args[0].upper() in ST: + set_st_window(table, config) + elif args[0].upper() in SEQ: # FIXME marche bien une fois mais pas deux ?? + set_seq(table, config) + elif args[0].upper() in CHECK: + check_window(table, config) + elif args[0].upper() in QUIT: + None + else: + print("\033[93m" + + ("Warning: {} is not recognized " + "as a valid keyword.").format(args[0]) + + "\033[0m") + except Exception as e: + print("\033[91m" + + "Error: Your operation is not recognized".format(args[0]) + + "\033[0m") + return table + + + diff --git a/activate.sh b/activate.sh new file mode 100644 index 0000000..5ff6c41 --- /dev/null +++ b/activate.sh @@ -0,0 +1,2 @@ +#!/bin/bash +source "venv/bin/activate" diff --git a/requirements.txt b/requirements.txt new file mode 100644 index 0000000..aa5a2d0 --- /dev/null +++ b/requirements.txt @@ -0,0 +1,23 @@ +astropy==7.0.0 +astropy-iers-data==0.2024.11.25.0.34.48 +astroquery==0.4.7 +beautifulsoup4==4.12.3 +certifi==2024.8.30 +charset-normalizer==3.4.0 +html5lib==1.1 +idna==3.10 +jaraco.classes==3.4.0 +jaraco.context==6.0.1 +jaraco.functools==4.1.0 +keyring==25.5.0 +more-itertools==10.5.0 +numpy==2.1.3 +packaging==24.2 +pyerfa==2.0.1.5 +pyvo==1.6 +PyYAML==6.0.2 +requests==2.32.3 +six==1.16.0 +soupsieve==2.6 +urllib3==2.2.3 +webencodings==0.5.1