""" * COSMIC-VIS : Cluster Orbital SysteM Integration Code - Visualisation * Version 2 - 2024-02-27 @ Yaƫl Moussouni @ Unistra, P&E, MSc1-MoFP @ Observatory of Strasbourg (Intern) """ import numpy as np import matplotlib.pyplot as plt import matplotlib.animation as animation import os # * Parameters if "YII" in plt.style.available: plt.style.use("YII") if "YII_light" in plt.style.available: light = "YII_light" else: light = "default" # * Variables in_directory = "./COSMIC_output/" out_directory = "../Figs/COSMIC_figs/" cluster_suffix = "_cluster.csv" stars_suffix = "_stars.csv" YES = ["Y", "YES", "1", "OUI"] MARKER = ["o", "s", "D", "v", "^", "<", ">"] Tmin = 2000 # K - Temperature truncation Tmax = 10000 # K - Temperature truncation # * Functions def density_hist(X,Y,M,T,bins,i): x_cm = np.average(X[i], weights=M[i]) y_cm = np.average(Y[i], weights=M[i]) Radius = np.sqrt((X[i]-x_cm)**2 + (Y[i]-y_cm)**2) Rho = np.zeros(len(bins)-1) for k in range(len(bins)-1): r1 = bins[k] r2 = bins[k+1] w = np.where((Radius > r1) & (Radius < r2)) Rho[k] = np.sum(M[i,w])/(4*np.pi*r2**3/3 - 4*np.pi*r1**3/3) return Rho # * Listing files for selection filelist = np.sort(os.listdir(in_directory)) filelist = [f for f in filelist if f[0] != "."] dates = [] for f in filelist: if len(f) == len("YYYY-MM-DD_HH:MM_cluster.csv") or len(f) == len("YYYY-MM-DD_HH:MM_stars.csv"): date = f[0:16] if not date in dates: dates.append(date) # * File selection print("\033[36m"+"Available dates:"+"\033[0m") for i in range(len(dates)): print("\033[36m"+"\t{}: ".format(i+1) + "\033[0m" + "{}".format(dates[i].replace("h", ":").replace("_", " "))) j = int(input("\033[32m"+"Select a date number: "+"\033[0m"))-1 print("") date_prefix = dates[j] # * Data collection cluster = np.loadtxt(in_directory+date_prefix+cluster_suffix, skiprows=1, comments="#", delimiter=",") stars = np.loadtxt(in_directory+date_prefix+stars_suffix, skiprows=1, comments="#", delimiter=",") T = cluster[:,1] E = cluster[:,2] DE = cluster[:,3] L = cluster[:,4] DL = cluster[:,5] M = np.zeros(np.int32(stars[-1,0:2])+1) X = np.zeros(np.int32(stars[-1,0:2])+1) Y = np.zeros(np.int32(stars[-1,0:2])+1) Z = np.zeros(np.int32(stars[-1,0:2])+1) VX = np.zeros(np.int32(stars[-1,0:2])+1) VY = np.zeros(np.int32(stars[-1,0:2])+1) VZ = np.zeros(np.int32(stars[-1,0:2])+1) Lumi = np.zeros(np.int32(stars[-1,0:2])+1) Radi = np.zeros(np.int32(stars[-1,0:2])+1) Temp = np.zeros(np.int32(stars[-1,0:2])+1) for star in stars: i = np.int32(star[0]) j = np.int32(star[1]) M[i,j] = star[2] X[i,j] = star[3] Y[i,j] = star[4] Z[i,j] = star[5] VX[i,j] = star[6] VY[i,j] = star[7] VZ[i,j] = star[8] Lumi[i,j] = star[9] Radi[i,j] = star[10] Temp[i,j] = star[11] N_iter = i N_part = j x_cm = np.array([np.average(X[i], weights=M[i]) for i in range(N_iter)]) y_cm = np.array([np.average(Y[i], weights=M[i]) for i in range(N_iter)]) z_cm = np.array([np.average(Z[i], weights=M[i]) for i in range(N_iter)]) lim_min = np.min((X,Y)) lim_max = np.max((X,Y)) Alpha = np.clip((np.log(Lumi) - np.min(np.log(Lumi)))/(np.max(np.log(Lumi)) - np.min(np.log(Lumi))), 0.1, 1) # * Output choice print("\033[36m"+"Choose figures:"+"\033[0m") figure_1 = input("\033[32m"+"\tFigure 1 (energy, angular momentum, time): "+"\033[0m").upper() in YES figure_2 = input("\033[32m"+"\tFigure 2a and 2b (positions, speed): "+"\033[0m").upper() in YES figure_3 = input("\033[32m"+"\tFigure 3 (mass distribution): "+"\033[0m").upper() in YES figure_4 = input("\033[32m"+"\tFigure 4 (density distribution): "+"\033[0m").upper() in YES figure_5 = input("\033[32m"+"\tFigure 5 (HR diagram): "+"\033[0m").upper() in YES print("") print("\033[36m"+"General settings:"+"\033[0m") time = np.int32(input("\033[32m"+"\tStatic images drawing instant ({} < int < {}): ".format(0,N_iter)+"\033[0m")) if input("\033[32m"+"\tWindow size restriction (y/n): "+"\033[0m").upper() in YES: lim = np.float32(input("\033[32m"+"\t\tLimit [pc]: "+"\033[0m")) lim_min = -lim/2 lim_max = +lim/2 print("") draw_time = scatter_time = distrib_time = diagram_time = time if figure_1: print("\033[36m"+"Figure 1 (energy, angular momentum, time):"+"\033[0m") plot_E = input("\033[32m"+"\tPlot energy vs. time (y/n): "+"\033[0m").upper() in YES plot_L = input("\033[32m"+"\tPlot angular momentum vs. time (y/n): "+"\033[0m").upper() in YES plot_save = input("\033[32m"+"\tSave figure (y/n): "+"\033[0m").upper() in YES print("") else: plot_E = plot_L = plot_save = False if figure_2: print("\033[36m"+"Figure 2a and 2b (positions, speed):"+"\033[0m") scatter_2D = input("\033[32m"+"\tScatter positions in 2D (y/n): "+"\033[0m").upper() in YES scatter_3D = input("\033[32m"+"\tScatter positions in 3D (y/n): "+"\033[0m").upper() in YES scatter_speed = input("\033[32m"+"\tShow speed vectors (y/n): "+"\033[0m").upper() in YES scatter_save = input("\033[32m"+"\tSave figure (y/n): "+"\033[0m").upper() in YES scatter_animate = input("\033[32m"+"\tAnimate over time (y/n): "+"\033[0m").upper() in YES print("") else: scatter_2D = scatter_3D = scatter_speed = scatter_save = scatter_animate = False if figure_3: print("\033[36m"+"Figure 3 (mass distribution):"+"\033[0m") distrib_mass = input("\033[32m"+"\tShow mass distribution (y/n): "+"\033[0m").upper() in YES distrib_bins = np.int32(input("\033[32m"+"\tNumber of bins (int): "+"\033[0m")) distrib_save = input("\033[32m"+"\tSave figure (y/n): "+"\033[0m").upper() in YES print("") else: distrib_mass = distrib_bins = distrib_save = False if figure_4: print("\033[36m"+"Figure 4 (density distribution):"+"\033[0m") draw_density = input("\033[32m"+"\tShow density distribution (y/n): "+"\033[0m").upper() in YES draw_bins = np.float32(input("\033[32m"+"\tWidth of bins [pc]: "+"\033[0m")) draw_max = np.float32(input("\033[32m"+"\tMaximum distance [pc]: "+"\033[0m")) draw_save = input("\033[32m"+"\tSave figure (y/n): "+"\033[0m").upper() in YES draw_animate = input("\033[32m"+"\tAnimate over time (y/n): "+"\033[0m").upper() in YES print("") else: draw_density = draw_bins = draw_max = draw_save = draw_animate = False if figure_5: print("\033[36m"+"Figure 5 (HR diagram):"+"\033[0m") diagram_HT = input("\033[32m"+"\tDraw HR diagram (y/n): "+"\033[0m").upper() in YES diagram_save = input("\033[32m"+"\tSave figure (y/n): "+"\033[0m").upper() in YES diagram_animate = input("\033[32m"+"\tAnimate over time (y/n): "+"\033[0m").upper() in YES else : diagram_HT = diagram_save = diagram_animate = False # * Plotting if plot_E or plot_L: fig1, axs1 = plt.subplots(2, sharex=True) if plot_E and not plot_L: # Just the energy axs1[1].set_xlabel("$t\\ [\\mathrm{{Myr}}]$") axs1[0].set_ylabel("$E\\ [\\mathrm{{pc^2\\ M_\\odot\\ Myr^{{-2}}}}]$") axs1[1].set_ylabel("$\\Delta E/E_0$") axs1[0].plot(T, E, color="C3") axs1[1].plot(T, DE, color="C3") elif plot_L and not plot_E: # Just the angular momentum axs1[1].set_xlabel("$t\\ [\\mathrm{{Myr}}]$") axs1[0].set_ylabel("$L\\ [\\mathrm{{pc^2\\ M_\\odot\\ Myr^{{-1}}}}]$") axs1[1].set_ylabel("$\\Delta L/L_0$") axs1[0].plot(T, L, color="C4") axs1[1].plot(T, DL, color="C4") elif plot_L and plot_E: # ...both xas1 = [axs1[i].twinx() for i in range(len(axs1))] axs1[1].set_xlabel("$t\\ [\\mathrm{{Myr}}]$") axs1[0].set_ylabel("$E\\ [\\mathrm{{pc^2\\ M_\\odot\\ Myr^{{-2}}}}]$") axs1[1].set_ylabel("$\\Delta E/E_0$") xas1[0].set_ylabel("$L\\ [\\mathrm{{pc^2\\ M_\\odot\\ Myr^{{-1}}}}]$") xas1[1].set_ylabel("$\\Delta L/L_0$") axs1[0].plot(T, E, color="C3") axs1[1].plot(T, DE, color="C3") xas1[0].plot(T, L, color="C4") xas1[1].plot(T, DL, color="C4") axs1[0].tick_params(axis='y', which="both", colors='C3') axs1[0].yaxis.label.set_color('C3') xas1[0].tick_params(axis='y', which="both", colors='C4') xas1[0].yaxis.label.set_color('C4') axs1[1].tick_params(axis='y', which="both", colors='C3') axs1[1].yaxis.label.set_color('C3') xas1[1].tick_params(axis='y', which="both", colors='C4') xas1[1].yaxis.label.set_color('C4') if plot_save: fig1.tight_layout() fig1.savefig(out_directory+date_prefix+"_figure_1") print("\033[94m"+"Info: Figure saved as " + "\033[0m" + date_prefix+"_figure_1") if scatter_2D or scatter_3D: if scatter_2D: fig2a, ax2a = plt.subplots(1) # ax2a.set_facecolor('k') i = scatter_time ax2a.set_title("$t =$ {:.2f} Myr".format(T[i])) if scatter_speed: qvr2a = ax2a.quiver(X[i]-x_cm[i],Y[i]-y_cm[i],VX[i],VY[i], alpha=0.1, headwidth=2, headlength=2, headaxislength=2, color="k") ax2a.quiverkey(qvr2a, 0.95, 0.05, 1, "Velocity scale: $1\mathrm{{~km\\cdot s^{{-1}}}}$", labelpos='W', coordinates='figure', color="k", alpha=1) sct2a = ax2a.scatter(X[i]-x_cm[i],Y[i]-y_cm[i],s=np.clip(Radi[i]**2,0.5,30), c=Temp[i], alpha=Alpha[i], cmap="RdYlBu", vmin=Tmin, vmax=Tmax) ax2a.set_xlabel("$x$ [pc]") ax2a.set_ylabel("$y$ [pc]") ax2a.set_xlim(lim_min, lim_max) ax2a.set_ylim(lim_min, lim_max) ax2a.set_aspect("equal") fig2a.colorbar(sct2a, label="Stellar effective temperature $T$ [K]", extend='both') fig2a.tight_layout() if scatter_save: fig2a.savefig(out_directory+date_prefix+"_figure_2a") print("\033[94m"+"Info: Figure saved as " + "\033[0m" + date_prefix+"_figure_2a") if scatter_3D: fig2b, ax2b = plt.subplots(1, subplot_kw={"projection": "3d"}) # ax2b.set_facecolor('k') i = scatter_time ax2b.set_title("$t =$ {:.2f} Myr".format(T[i])) if scatter_speed: qvr2b = ax2b.quiver(X[i]-x_cm[i],Y[i]-y_cm[i],Z[i]-z_cm[i],VX[i],VY[i],VZ[i], alpha=0.1, color="k") # ax2b.quiverkey(qvr2b, 0.95, 0.05, 2, "Velocity scale: $2\mathrm{{~km\\cdot s^{{-1}}}}$", labelpos='W', coordinates='figure') sct2b = ax2b.scatter(X[i]-x_cm[i],Y[i]-y_cm[i],Z[i]-z_cm[i],s=np.clip(Radi[i]**2,0.5,30), c=Temp[i], alpha=Alpha[i], cmap="RdYlBu", vmin=Tmin, vmax=Tmax) ax2b.set_xlabel("$x$ [pc]") ax2b.set_ylabel("$y$ [pc]") ax2b.set_zlabel("$z$ [pc]") ax2b.set_xlim(lim_min, lim_max) ax2b.set_ylim(lim_min, lim_max) ax2b.set_zlim(lim_min, lim_max) ax2b.set_aspect("equal") fig2b.colorbar(sct2b, label="Stellar effective temperature $T$ [K]", location="left", extend='both') fig2b.tight_layout() if scatter_save: fig2b.savefig(out_directory+date_prefix+"_figure_2b") print("\033[94m"+"Info: Figure saved as " + "\033[0m" + date_prefix+"_figure_2b") if distrib_mass: fig3, ax3 = plt.subplots(1) i = distrib_time ax3.set_title("$t =$ {:.2f} Myr".format(T[i])) nbins = distrib_bins hist, lbin = np.histogram(M[i], nbins) cbins = 0.5*(lbin[1:]+ lbin[: -1]) ax3.scatter(cbins, hist, s=5) ax3.set_xscale ("log") ax3.set_yscale ("log") ax3.set_xlabel("Masses $M\\ [\\mathrm{{M_\\odot}}]$") ax3.set_ylabel("Star distribution") if distrib_save: fig3.savefig(out_directory+date_prefix+"_figure_3") print("\033[94m"+"Info: Figure saved as " + "\033[0m" + date_prefix+"_figure_3") if draw_density: fig4, ax4 = plt.subplots(1) i = draw_time bin_width = draw_bins bin_max = draw_max bins = np.arange(0,bin_max,bin_width) Rho = density_hist(X,Y,M,T,bins,i) cbins = 0.5*(bins[1:]+ bins[: -1]) ax4.set_title("$t =$ {:.2f} Myr".format(T[i])) ax4.set_xscale ("log") ax4.set_yscale ("log") ax4.set_xlabel("Distance from center $r$ [pc]") ax4.set_ylabel("Stellar masses density $\\rho\\ [\\mathrm{{M_\\odot\\ pc^{{-3}}}}]$") ax4.scatter(cbins, Rho, s=5) fig4.tight_layout() if draw_save: fig4.savefig(out_directory+date_prefix+"_figure_4") print("\033[94m"+"Info: Figure saved as " + "\033[0m" + date_prefix+"_figure_4") if diagram_HT: fig5, ax5 = plt.subplots(1) ax5.invert_xaxis() i = diagram_time ax5.set_title("$t =$ {:.2f} Myr".format(T[i])) ax5.set_xlabel("Temperature $T$ [K]") ax5.set_ylabel("Luminosity $L\\ [\\mathrm{{L_\\odot}}]$") ax5.set_xscale ("log") ax5.set_yscale ("log") ax5.scatter(Temp[i], Lumi[i], s=5, alpha=Alpha[i], c=Temp[i], cmap="RdYlBu", vmin=Tmin, vmax=Tmax) fig5.tight_layout() if diagram_save: fig5.savefig(out_directory+date_prefix+"_figure_5") print("\033[94m"+"Info: Figure saved as " + "\033[0m" + date_prefix+"_figure_5") if scatter_animate: figA2a,axA2a = plt.subplots(1) # ax2a.set_facecolor('k') axA2a.set_title("$t =$ {:.2f} Myr".format(T[0])) if scatter_speed: qvr = axA2a.quiver(X[0]-x_cm[0],Y[0]-y_cm[0],VX[0],VY[0], alpha=0.5, headwidth=2, headlength=2, headaxislength=2, color="k") axA2a.quiverkey(qvr, 0.95, 0.05, 1, "Velocity scale: $1\mathrm{{~km\\cdot s^{{-1}}}}$", labelpos='W', coordinates='figure', color="k", alpha=1) sctA2a = axA2a.scatter(X[0]-x_cm[0],Y[0]-y_cm[0],s=np.clip(Radi[0]**2,0.5,30), c=Temp[0], alpha=Alpha[0], cmap="RdYlBu", vmin=Tmin, vmax=Tmax) figA2a.colorbar(sctA2a, label="Stellar effective temperature $T$ [K]", extend='both') axA2a.set_xlabel("$x$ [pc]") axA2a.set_ylabel("$y$ [pc]") axA2a.set_aspect("equal") axA2a.set_xlim(lim_min, lim_max) axA2a.set_ylim(lim_min, lim_max) figA2a.tight_layout() def anim2a(i): if scatter_speed: qvr.set_offsets(np.array([X[i]-x_cm[i],Y[i]-y_cm[i]]).T) qvr.set_UVC(VX[i],VY[i]) axA2a.set_title("$t =$ {:.2f} Myr".format(T[i])) sctA2a.set_offsets(np.array([X[i]-x_cm[i],Y[i]-y_cm[i]]).T) sctA2a.set_array(Temp[i]) sctA2a.set_sizes(np.clip(Radi[i]**2,0.5,30)) sctA2a.set_alpha(Alpha[i]) return sctA2a, ani2a = animation.FuncAnimation(fig=figA2a, func=anim2a, frames=N_iter, interval=100) if scatter_save: ani2a.save(out_directory+date_prefix+"_animation_2a.png", dpi=300, fps=10) ani2a.save(out_directory+date_prefix+"_animation_2a.pdf", dpi=300, fps=10) print("\033[94m"+"Info: Animation saved as " + "\033[0m" + date_prefix+"_animation_2a") if draw_animate: figA4, axA4 = plt.subplots(1) bin_width = draw_bins bin_max = draw_max bins = np.arange(0,bin_max,bin_width) cbins = 0.5*(bins[1:]+ bins[: -1]) Rho = np.array([density_hist(X,Y,M,T,bins,k) for k in range(N_iter)]) axA4.set_title("$t =$ {:.2f} Myr".format(T[0])) sctA4 = axA4.scatter(cbins, Rho[0], s=5) axA4.set_xscale ("log") axA4.set_yscale ("log") axA4.set_ylim(top=np.max(Rho)) axA4.set_xlabel("Distance from center $r$ [pc]") axA4.set_ylabel("Stellar masses density $\\rho\\ [\\mathrm{{M_\\odot\\ pc^{{-3}}}}]$") figA4.tight_layout() def anim4(i): axA4.set_title("$t =$ {:.2f} Myr".format(T[i])) sctA4.set_offsets(np.array([cbins, Rho[i]]).T) return sctA4 ani4 = animation.FuncAnimation(fig=figA4, func=anim4, frames=N_iter, interval=100) if scatter_save: ani4.save(out_directory+date_prefix+"_animation_4.png", dpi=300, fps=10) ani4.save(out_directory+date_prefix+"_animation_4.pdf", dpi=300, fps=10) print("\033[94m"+"Info: Animation saved as " + "\033[0m" + date_prefix+"_animation_4") if diagram_animate: figA5, axA5 = plt.subplots(1) axA5.invert_xaxis() axA5.set_title("$t =$ {:.2f} Myr".format(T[0])) axA5.set_xlabel("Temperature $T$ [K]") axA5.set_ylabel("Luminosity $L\\ [\\mathrm{{L_\\odot}}]$") axA5.set_xscale ("log") axA5.set_yscale ("log") axA5.set_xlim(np.max(Temp), np.min(Temp)) axA5.set_ylim(np.min(Lumi), np.max(Lumi)) sctA5 = axA5.scatter(Temp[0], Lumi[0], s=5, alpha=Alpha[0], c=Temp[0], cmap="RdYlBu", vmin=Tmin, vmax=Tmax) fig5.tight_layout() def anim5(i): axA5.set_title("$t =$ {:.2f} Myr".format(T[i])) sctA5.set_offsets(np.array([Temp[i], Lumi[i]]).T) sctA5.set_array(Temp[i]) ani5 = animation.FuncAnimation(fig=figA5, func=anim5, frames=N_iter, interval=100) if diagram_save: ani5.save(out_directory+date_prefix+"_animation_5.png", dpi=300, fps=10) ani5.save(out_directory+date_prefix+"_animation_5.pdf", dpi=300, fps=10) print("\033[94m"+"Info: Animation saved as " + "\033[0m" + date_prefix+"_animation_5") # * SHOW ! plt.show(block=False) input("(press enter to quit)")